rs31275735 SNP Detail

Summary

• ID
  rs31275735
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156446725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAAGAATT GGGCAAATTA
  ACCTATAAGG GACCTGAAAG GCCCTTTAAA GATTTGATTT TTACTGTAAG TTTGGGACCA
  ATGAAGAATT TTAAATATAG AGTTACAAAA TATGACCTTT TTTTTACAAT TTAAAAGGAG
  TAAGTATAGA CACACAGAGA TCAGTACCTA GTGAAGGAAG CAGTGTTAAG TGACAAGGAT
  R
  AGTGAGAAAT GGATAGATTT CAGGTGTTTT AAAATTTCTC ATAAACTAGG CAGTGGTGGT
  GTACAACTTT AATCCCCGCA CTTGGGGAAG AAGAGGCAGG TGGATCTGTG AGTTCAAAGC
  CAGCCTGTTC TACAGAGCAA GTTGTAGGAT AGCCAGGGAT ACATAGAGAA ACCCTGTCCC
  AAAAAGCCAA AAAAATGTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49721406	NES13075075	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31275735					SNP	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49721406	NES13075075	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156446725 () rs orientation: forward

Symbol	Name	Function Class
Abl2	ABL proto-oncogene 2, non-receptor tyrosine kinase	Intron
Rr421205	regulatory region 421205	1606 bp distal
Rr421206	regulatory region 421206	1899 bp proximal