rs31255947 SNP Detail

Summary

• ID
  rs31255947
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147501914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATATAATT ACATTTTTCT
  TTACAGATAA ATAAAATCCT GCTGTGGGCC TTTGGGGGTG CAGAGAATGC TCAGCTTAAG
  TCCTGGCAGC GCAAACCAGA CTAAGGGGGT TTGGATCTGA AGTGAAATGC CTGGAGAGTG
  GTGGCATACC TTCTATTCCA GCACCAGAAG CAGAAACAAG CGTCCCTAGA GGTTGACTAA
  Y
  GTCTCTATAA GTTGGATAGT GAGGCAGGCC CATCACCAAG CTTTGGGTTT GATGGGGAGA
  CCATGACTCA AAGAATATGG CGAGAGAGCG TTTGGGAATG ATTCTTCCAT CAGTCTTGGG
  CTTCCATGGG CATGCATATG GTTGTTGCAT TTTTACCCAC AACCATACAG CCACTTCCGT
  GCCAACACTC ACCCACAGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	WSB/EiJ
ss47033267	NES10842220	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	WSB/EiJ
rs31255947					SNP	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47033267	NES10842220	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147501914 () rs orientation: forward

Symbol	Name	Function Class
Rr587161	regulatory region 587161	328 bp proximal