rs31250037 SNP Detail

Summary

• ID
  rs31250037
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:99970250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTGTCTGT ATGTATGCCT
  GCAATATTTA AAAATCAAGA ATGTTCTAGA ATAGTGTGCT GTCCAGTGCA ATTTCCGGCA
  ATGGAAATAT TCTCTCTGCC CTGTCTTACA TCGTGGCCAC TAGCCACATA TGGCCACTGA
  GCATTTGAAG TGTGGCTGAT GCCGCCAAAG AGCCAGATTA TTCATTCAAT TAAAATCTAA
  R
  CACTTTGTAT AGAGTAGCCA GAGCCCTAGA GAGTATGATT TTAGAATGGT GATTTACATT
  GTGTATGTGC TGTGTATACA TACATATATG TGCATACATT CATGTGTTTG TATGTGTGAG
  TGTATGTGTT ACATGTCTGT GTGTATATGT CTGTGTACGG GGTTTAATGT GTATATATGT
  GTGCATGTAT ATGCACATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48031211	NES11896135	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31250037					SNP	A	A	A	A	A	A	A	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48031211	NES11896135	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:99970250 () rs orientation: forward

Symbol	Name	Function Class
Rr635551	regulatory region 635551	1542 bp distal
Rr635552	regulatory region 635552	778 bp proximal