rs31247237 SNP Detail

Summary

• ID
  rs31247237
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27174263 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCAGTAAG CAGCACTCTC
  CATGGCCTCT GCATCAGCTC CTGCCTTCAG GTTCCTGCCC CGAGTTCTTT TGATGATGAA
  CAATGATATG AAAGTATACA TGCCAAATAC CCTTTCTTCC CTGAGTTGCT TTTGTTCGTG
  GTGTTTCATC ACAGCATTAT TAACCCTGAC TAGAACGGAG GAGGACAAAA AGTCACTGGA
  Y
  TCATGAAGGT TAAGAGACTG AGGCCAGGGC TTGAAAAGGT ACAGAGATGG CCACAATAAG
  AATTAAAGCA CAAGGGATCT TGGGAGCCAA TTATGGTAAA ATATGAAGGG GATATAAAAT
  TAAAAAACAA ATCACAGCTG TACTAAAAGC AAAGATAAAT TCCATAAGCA ATTGTTAAAG
  AAACCTAAAT AACCCAACCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45514537	mCV24689258	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss134702194	ENSMUSSNP2783697	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs31247237					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27174263 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574348	regulatory region 574348	1672 bp distal