rs31247224 SNP Detail

Summary

• ID
  rs31247224
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143656117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCATTCACTT CAACTTATCT AGATCTTAAA CCCTTTTTTG AGCAGCTTCC TGTTGCCCAG
  AGCAGTCCTA GCAAAGATGG CGGCATTTCC ATCTGTAGCT AAGATGAAAG GCACTTCTCT
  CTTTTGACTT ACTGATTAGA TGTGCATTAG TTTCATGACC TTCTATAACA AATTTTTACA
  AGCTTTGTGG CCTCACAGAA TCTTTTATCT TAGTTCTGAA GACTACAAGG TGCTCATAAT
  GCCCTGAATT AATCAAACAG TCCAGGAGAA ATGTTTTGAG AGCCGCAGTT GACCCACACA
  R
  CAAGGCGATA ATCAGCGGTG TTGGTTCTTT AATCCAGCAC ATCACTTCCG AAAGGGTGTT
  CTGCTGAGCA CTGGGCCCTG GGGATTCTTT AGATTTTAAA AATATAGGGG TTAGGATTAA
  GGTGTTCTAG AGTCAAATGA GTTTGGAAAA TCTGAACTCC TCCTTGGGGT GTCACAAATC
  ACAGTAGTTC AGTAAAGATT TGATCTGACA CATGCTTGGG AAGCTGTTTA ACTTTGTCAG
  ATTCATTGTT TTTCCAAACA TAATTGACCA AAACAGAGTA ATGAAAGGAA GAAGGAGAAG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45515221	mCV22812354	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31247224					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143656117 () rs orientation: forward

Symbol	Name	Function Class
Rr406686	regulatory region 406686	1870 bp distal
Rr586569	regulatory region 586569	277 bp distal