rs31244097 SNP Detail

Summary

• ID
  rs31244097
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153663410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTC AACCAGGCAT GGTGGCACGT
  R
  CCTGTAGTCC CAGCACTGAA GAGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45514137	mCV23501194	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss136115421	ENSMUSSNP4413047	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss321031953	CHEV_3_153620737	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31244097					SNP	G	G	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153663410 () rs orientation: forward

Symbol	Name	Function Class
Rr398135	regulatory region 398135	215 bp upstream
Rr587804	regulatory region 587804	1635 bp proximal
Rr587805	regulatory region 587805	1812 bp proximal
Tssr32440	transcription start site region 32440	624 bp upstream