rs31244007 SNP Detail

Summary

• ID
  rs31244007
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:99934831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGTTTTTG TGGGCTGAGC
  TTTAGAACGG CTCATCCTGC GCAGACGTTG CAGGTTCCAG CCAGAGCTCA GGGAAAATGC
  TAGTTCCCTG AGCCTCTCAG CTCACAACCC TGGGGACTAC AAGATCAGCT GGGAAGTGAG
  CCTCACCACA AACACAGCAC ATCTTGCTGA GACAGAGTGT GTGCGTGTGC ATGTGCACAC
  R
  CTATTTATTG GTTTATTGCT TCATTTCACA AATAATGAAT AAGCAGTGTC TCTATTTTCT
  CGTTTGGAAA ATGGAGGCAC AGTAGCCCCA CTGGGCCAGG AGACAGGCCT GCAATCCCAG
  CTACTTGAGA GGCCGAGGCC AAAGGATAAC TATTTCTTGG AAACAGAGCT GCCAGGGACA
  TGGTAACAAA CAGACCACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss48031077	NES11898413	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs31244007					SNP	A	A	A	A	A	A	G	A	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48031077	NES11898413	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:99934831 () rs orientation: forward

Symbol	Name	Function Class
Rr635541	regulatory region 635541	1759 bp proximal