rs31243140 SNP Detail

Summary

• ID
  rs31243140
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148572549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATACTCT ACGGTGCATA
  AAATAGCCGA AGTATAAAAC AGCACTGTAA AGCAGTCTGA GAGAAATAGA TCTCCCCCAC
  CCCAGCACAC AGAACCCCAG GATAGTGGGC AGCATGGAGA CTGAGGTAGA GATAAGCCAC
  CCACAGGGGC ACTACAACCA CGCAAACCCC AGGGACTGTT CTGATGACAA GCACAGGAGG
  K
  CTACAGGATT AAGCAGCTAA GGTTTTTTTT TTTTTAATTT AAAATATATC ACAGTAAAAT
  TGTAACTAAG GCTAGAATGA TACATGGTAA ATATTAAAAT AGTTAAGTTT GAATGATAAT
  GTGGCATTTT ATTTTTTTTA AAGACATCCT GCCCCATAAA TTTAAAAAAC ATGATCTAAG
  CAGTATATCC ATTACAATAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45512962	mCV23528711	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	T
ss136064588	ENSMUSSNP6875348	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss321016700	CHEV_3_148529877	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31243140					SNP	G	T	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148572549 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr375898	regulatory region 375898	1153 bp downstream
Rr587218	regulatory region 587218	773 bp proximal