rs31241720 SNP Detail

Summary

• ID
  rs31241720
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147333832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCAGTAAG TAGCACCACC
  CTCATATTAA AGCTGGAGGA CAAGGCAACC CAGTAGGTGG GAAAGGATTC CAAAATCAGT
  CAAAAGTGTC AGAGAGAGCA CCCATCCCCA CGGTGATGAG TCCCATGTGA AGTTCAAGGT
  ACACAACCAT AGCAGATATG CAGAGGACCT AGGTCAGACC TATGCAGGCT CCCTGAATGG
  Y
  GGTTCAGTCT CTGTGAACCC CTCTGAGCCC AGGTTAGTTG ATTTGTGGGT TCTCTTTGGT
  GTTCCTGAAT TCTCTAGTTC CTACAATCAT TGCTCCCCTC TTCCTTGGGA TTTGCCAAGC
  TCCACCTAGT GTTTGGCTGT GGATCTCTGC ACTGTTTATG TTCCTCTCTA GACGAACTCT
  TTCTGAGGAT GATTATTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss47031509	NES10849753	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31241720					SNP	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47031509	NES10849753	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147333832 () rs orientation: forward

Symbol	Name	Function Class
Gm36888	predicted gene, 36888	within coordinates
Rr587154	regulatory region 587154	116 bp proximal