rs31241693 SNP Detail

Summary

• ID
  rs31241693
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130506209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAGGCTGCGG TAGCTGTCAT AGGAGCATAG GAGACTCACA CATAATTGAT GCACCTAAGT
  GTGATATGGA GCTAATAGGG ATTAGGGCTT TTTGTTTGGT TGGTTGGTTT TGTTTATTGT
  GTTGTTACTA TTATTGTTGT TGTTGTTGTT GTTATTAAAG GGGTTTTTTT GTTGTTGTTT
  GGTCAGTTTT TTTGGTAGGT TTTTTTGTTG TTGTTGTGTG TGGTGGTGGT GGTGGTGGTG
  GTGTTTTTTG TTTTTTGTTT TTTGTGGGTT TTTGTTTTTT GTTTTTTGTT TTTGTTTTTT
  K
  TTGTTTTTGT TTTTGTTTTG TTTTTTTTGA GACAGTTTTT CACTGTATAG CCCTGGCTGT
  CTTCTCAGTA AACCAGGCTG GTCTCAAACT CAATGCTGGG ATTAAAGACA TTTTCCACCA
  CACTAGGCTT TGGGTCTTTT GGGTTGTTTG TTTGTTTGTT TGTTTTGCTT TTGGGGAGTT
  TTTGTTGGAG GTGGTGCTGG TTTTAGTTTG GTTTTCGTAT TTTTGGAAGG CTCACTTGGT
  TTTGTTTATT GGTTTTTTGG GGGGGGGGTT GTTGTTTGTT TTTTGGAAGG GTCATAGACC
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45513521	mCV22791501	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31241693					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130506209 () rs orientation: forward

Symbol	Name	Function Class
Rr585199	regulatory region 585199	1755 bp proximal