rs31236590 SNP Detail

Summary

• ID
  rs31236590
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138043341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACTTGGAGG CAGAGGCAGG CGGATTTCAG AGTTCGAGGC
  CAGCCTGGTC TACTGAGTGA GTTCCAAGAC AGCCAGGACT ATTCAGAGAA ACCCTGTCTC
  R
  AAAAAACAAA AAACATAAAA CAAAAAACAA ACAAAGAAAC AAACAAAAAC TACAAATTCC
  TTGATAATCA AATTTCTTGA TAATAAATTC TTATTATTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45512026	mCV23937779	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss135951866	ENSMUSSNP4800925	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320979576	CHEV_3_138000544	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31236590					SNP	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138043341 () rs orientation: forward

Symbol	Name	Function Class
Rr586126	regulatory region 586126	924 bp distal