rs31236550 SNP Detail

Summary

• ID
  rs31236550
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9664059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCACT CCCCCAAAAT ATACACAATT
  W
  AAAAAAAAAC ACAATAAATA AGTTC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45511383	mCV23606010	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss134576646	ENSMUSSNP15744	ENSEMBL	ENSEMBL_Sanger	f	SNP				A
ss320651637	CHEV_3_9598999	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31236550					SNP	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9664059 () rs orientation: forward

Symbol	Name	Function Class
Rr374491	regulatory region 374491	within coordinates
Rr573453	regulatory region 573453	664 bp distal
Rr573454	regulatory region 573454	718 bp distal
Rr573455	regulatory region 573455	704 bp proximal
Rr573456	regulatory region 573456	1661 bp proximal
Zfp704	zinc finger protein 704	Intron