rs31232711 SNP Detail

Summary

• ID
  rs31232711
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127796950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACACTGTG GTGCGAGACC
  ATGATTCATA CGAAAGGCAG CATAATTACT GTGAAGAGCA GATTGGATTT CCAAATGAGG
  AAAGCGCATT CTAGTTCTTT CTTGGCTACG GATAAACACA ATTGATTTAT GATGAATATG
  AGGGTCCTGG TTATCTGGCA AATGTATTGT ATTTCATGTC GAATAAGCTT AGAGATTTTT
  W
  TTTATTTTTT TATTTTTTGC ATGTCTACAT GAAACCCAAT CTGTGCACAA CCAGGAGAGC
  CCGAAGGAAT GGTGGCTGGA ACTCCTGATG GATGGGAGGA GTGCCACACC GGGCACTCCA
  GAGGGCAGCA TATCTGCTTC CCACCAGCAG TGAGACCACT GTGTGCCTCA GTTTGAATAG
  CAGAGAAGCG TAGGTTTATA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45511437	mCV25235069	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss135877565	ENSMUSSNP205245	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss320959106	CHEV_3_127706219	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31232711					SNP	A	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127796950 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	932 bp distal
Rr584917	regulatory region 584917	1219 bp distal