rs31232241 SNP Detail

Summary

• ID
  rs31232241
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100825438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGGCAGG GGTAGGAGGC
  AGCTTGCTCA CATCTGGGCA AGTCAAGAAG CAGAGAGCAC AGTGGAATTC GGGCAGCTAG
  AAAAATCTCA AAGCACCCCA CCCAGCCACA GAGGGCCTTT TCCTCCAGCG AGTCTCTACC
  AACGAAAAGT TGACAATCCT CCCCACACAA CACCACCAAC TAGGACTGAG TGGTCAGACA
  M
  TGAAGCTATG GGAGACACTC CATTCAAGCC ACACTGGTCT TCTCCAGAAC CTTAGCTAAA
  AAGAAGAGGA AAGGGCGGCT GAGGAGCACA GACAGAAGGT GAAACTGAAG TGTGAGTGTG
  AGAAAGATTC ATAGTTAGGA GGGGATGAGG CACAAGTTGG GATGGGATTG GACATTTAGA
  CTAGAGGTGT CAGGAGCAAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45511793	mCV25367932	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A	A
ss320850260	CHEV_3_100722045	CHEVERUD	SCREENING_POP	f	SNP						C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31232241					SNP	A	A	C	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100825438 () rs orientation: forward

Symbol	Name	Function Class
Rr581925	regulatory region 581925	905 bp distal
Rr581926	regulatory region 581926	1164 bp distal