rs31230809 SNP Detail

Summary

• ID
  rs31230809
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67334977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCCCATCT TCTTGAGGAG
  CTACCACACT GATTTCCAAA ACGGCTGTAC AAGTTTGTGC ACCTGTACAA ATCACAGGTA
  TAATCAAAGG TTATCATTGG TTGTTCCGAA TCTAGGTAAT ACTTGCCAAC AAAGGTACAG
  AGCATTTCCA ATGCTACATT TGTGAGTTGG GCTGATGTTA TTAAAGAATG GTTCTGACAT
  R
  GCTTTTTTTT TTTTACAAGA ATAAGAGTTA TGAAAGACAT CATGGTGATT TATCATGTGA
  TATCATGATA GATATTAAAT ACAATGAACT ACGGGAGAAA GAACAGGATG TGTGCAGATG
  TAGAAAGGAG TGAGGGAGCT GTTGAAACTT GTCGGGCAGA GGTGTACAAA TTAAGAAGAC
  AAATGACTTA AGGAACAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45511053	mCV24618048	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss135257620	ENSMUSSNP5076521	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31230809					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67334977 () rs orientation: forward

Symbol	Name	Function Class
Rr577916	regulatory region 577916	1846 bp proximal
Rr577917	regulatory region 577917	1962 bp proximal