rs31201994 SNP Detail

Summary

• ID
  rs31201994
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83015729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGCATGG GTGACATCAC
  GCCACAGATC ACATTCCCTA GTGACACTGG GAGTTGTGTC AGCTCCTGTG ATTATATTTT
  GTGACATTGC TACCATGACA GAATTGACTA CTGATTTCTC ACAGATGTCC CTGATGTTGA
  GTGGTATGTA TTTTCGATTG GTATTGTTTC TTGAATATTT AGAATCTTAA AGCTGGGTGA
  Y
  GGGGAGTACA CCTCTAACTT CATTCCTCTC GAGGTAGAAG CAGCAAGGCT GTGAGTTCAA
  GGCTAGCTTC TCTCTCAAAT GCTGGGCAGT GTGACAGTGA GCTATAGCCC TCAGTCACAG
  ACATGAGCAT ATGGAGAAAG GACAGAGCCC TGTAGTGTAC TGTCTTGCTT GCCATTTTGA
  GTATAAATAT TCAATAAATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45510261	mCV25188747	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss135411377	ENSMUSSNP7008291	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31201994					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83015729 () rs orientation: forward

Symbol	Name	Function Class
Rr578836	regulatory region 578836	1824 bp proximal
Rr578837	regulatory region 578837	1938 bp proximal