rs31200977 SNP Detail

Summary

• ID
  rs31200977
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124068442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTACATTTT AACTTACCAA
  CTTCTAACAT ATTTCTTTGA GTTTAAAAAA AAATACGCTT GATACTCTTC TTCTTAACAG
  AGATTGATGA TAAAATATTC ACTTTATTTC ATTTATTTTA AGGGCTCTTT AATTTATTTG
  TCAGAATTTA TTTAATATTT TCTATTATCT TTCATAATTT AATATGAAAT CACTAACATA
  M
  TTTTCAGTTT ATTTCCATTT CAGGATGTTC TTAGTATATT ATGAAGTGGA ACTTTAATGA
  TATGTCTATT TCTTCTGAAT TATTGAATGT CTCTCCGGTC TTTCATTTTG GGATTTTTGC
  GGAGTTAGTA TTTTATGAAG ATAGATTTTT ATGAAGATGA ATTAAGGGTC GTCAAAACTG
  CCTTCATCTA CCCCCTGTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45509478	mCV24048903	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31200977					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124068442 () rs orientation: forward

Symbol	Name	Function Class
Gm43731	predicted gene 43731	within coordinates
Rr584584	regulatory region 584584	1433 bp distal
Rr584585	regulatory region 584585	102 bp proximal