rs31200533 SNP Detail

Summary

• ID
  rs31200533
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143852920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGGCCTA GTCGGCCATC
  ACTGGAAAGA GAGGCCCATT GGACTTGCAA ACTTTATATG CCCCAGTACA GGGGAACACC
  AGGGCCAAAA AGGGGGAGTG GGTGGGCAGG GGAGTGGGGG TTGTGGGTAT GGGGGACTTT
  TGGTATAGCA TTGGAAATGT AAATGAGCTA AATACCTAAT AAAAAATGGA AAAAAAGACC
  Y
  CCCCGATACT TTTAATTAAA TTATTCTTCT CTTAACAATA AATAAATAAA TAAATAAATA
  AATAAATAAA TAAATAAATA AATAAATTGG GTGAGTATCC TCAGACTATT GCTTTAGCCT
  TGACCGATAC ATTCTTTGGA GAAAAGTGTA TAACAGAGAA ATCCCAACAT TCTAAGTGAT
  GTTTCACAGC TAAAAATTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45510355	mCV23567597	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31200533					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143852920 () rs orientation: forward

Symbol	Name	Function Class
Rr586587	regulatory region 586587	255 bp proximal