rs31200263 SNP Detail

Summary

• ID
  rs31200263
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147976928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACCACAT AGAACAGGCT
  ATACTGCCTT TTCATTATTA TAAACTAAAG TTATGGTGAC TCAGGAATAT TTCATAGAGG
  GAAATGAGAT GTAATGAGAC CTCTCTTCCA AATTCAATGT TTTTGGTAAA AGTGGCCTGA
  AACATTTCAT TTACCAACTG AAAATATACA AAGTTTCTAT TAAAATTATA CTTGTTGATA
  R
  GTTAATTACT AACGATCAGT ATCAATAAGT CTTAGGCAAT TTTGTCCCTT GGGCATTCTC
  TTAAGATGGA TGGAAGAAAA TTAGCCCATT CAGTGGTGAC TTGGTTAATA ACCAGTTTGT
  TCAACTTTCC TTTGCTTTCT GTCCCTGTCG GCGTAGTGGA TGTCTAAACA ACGGTATTTG
  GTCAAGCCCT GATAGATCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45509866	mCV22801867	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss136057869	ENSMUSSNP5501238	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss321014828	CHEV_3_147934256	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31200263					SNP	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147976928 () rs orientation: forward

Symbol	Name	Function Class
Rr587183	regulatory region 587183	664 bp proximal
Rr587184	regulatory region 587184	1278 bp proximal