rs31199419 SNP Detail

Summary

• ID
  rs31199419
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:120899384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTAAGTGTG CACTCCAAAA AGGAGTCAGG CCAAGGGACT
  CAAGTCGAGC TCTGCTTTCT CTGATGTCAG CTTTTTCTTA GCAGGCCGGC AGGGGGGTTG
  S
  TAGGCTCTGT GCCTTTGGAG CAGGATCACC CAGAAGGTGC TCTGTCCGTG ATATACTTAT
  CTTGCTGCTA GGCAAGAAAC AGATAACATC ATCATGGGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45509744	mCV23386585	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss135713512	ENSMUSSNP328655	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31199419					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:120899384 () rs orientation: forward

Symbol	Name	Function Class
Gm65499	predicted gene, 65499	451 bp upstream
Rr397968	regulatory region 397968	593 bp downstream
Rr584004	regulatory region 584004	143 bp distal
Rr584005	regulatory region 584005	707 bp distal