rs31198605 SNP Detail

Summary

• ID
  rs31198605
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125099124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCAAAAAG CCAAAGACAG
  TGACTGTGGC CACATAATTG ATGAGTTAAA CGAGTTTTCT TTCTGCAAAA CAATTTTAAA
  GCTGAGTAAC CCAAATTTAT TAGCTGTGTC CAGATGGAGC ATAAAGCCAA TATATTGTTG
  TTTATGCATC AAGTCAGATA AAATTATTAA GGATGATTTC AGCTGTGGAT GGTTAGGGTA
  S
  GGGACCTTGG TTAAATTTTA AGGCTATAAT TCAAATAAAT TTTAGTAGCT ACAAAGCTTG
  AATAACAAAT AGTCTAAGTG TGTTATAATA GATTTTGTTG AACTATTTTA CTGTTTTAAA
  ATATATACAG CTGAAATTTA AGTAACAACT CCCTAAAGCA TTTCATGAGA CACTACTGGA
  AGGAAATACT TTATTCGGGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45509631	mCV24036718	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
ss135806110	ENSMUSSNP3642522	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		C
ss320935441	CHEV_3_125008393	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31198605					SNP	G	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125099124 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	1266 bp proximal