rs31194919 SNP Detail

Summary

• ID
  rs31194919
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146016911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTTTGGGG ATGTCAAAGG
  CTTGAGTCAG TTCCCAAAAG TGCAGGAACC AGGAATAGAT GAGTGTTTTC TCTGCATAGC
  CAGATGTGCT CAAAAGAGCT GGCAATCGGT CGGTCATGTT AGATTAATCC AAATACAGTG
  AAGAAGTTGA AGAAGTGAAG AGCATTCATT TCAGGAGAGA CTGGGTATGC ACAGCGCTTC
  M
  CTTGGCCCTA AGGCAGACAA CTTCCAGACC GCAGTCAGTC CCTTCATTCA GATCAAAAGA
  AACCAGGCCT TGTGGGGGAG GAAAAACAGG TTCTCCGAAG TTCAGATGAA AGAGGTCTGA
  GAAAGAATCG GTTTCAAATC CCTGGCTGGT CCAGTGATTG AGAGGCCCTG ATACCAACAC
  CAATTAAGTA AGCAGCGGCG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J
ss47026304	NES10847515	PERLEGEN	MM_PANEL2	f	SNP	C		A	C	A	C	C	C		A
ss136043017	ENSMUSSNP3086730	ENSEMBL	ENSEMBL_Sanger	f	SNP		C					C
ss321009834	CHEV_3_145974120	CHEVERUD	SCREENING_POP	f	SNP									A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J
rs31194919					SNP	C	C	A	C	A	C	C	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47026304	NES10847515	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146016911 () rs orientation: forward

Symbol	Name	Function Class
D3Mit292	DNA segment, Chr 3, Massachusetts Institute of Technology 292	640 bp proximal
Rr586996	regulatory region 586996	within coordinates