rs31194163 SNP Detail

Summary

• ID
  rs31194163
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:150197615 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTCAGGAG TACATGTGTA
  TTTAGCATCA TATTACTTAT CTTAAATACT TGTTTTTTGT GGAACAAGTA GTTAAACACA
  GAGCCTGCAA GACAAGCACT TCACACTGAA CTAAATCCTC AGGTCACTTT TGTTTTGAGA
  TAGAGTGTCA CTATACTGCA CAAGCTATCC TCAAATGTGT ATTCCCACTG CCTCATCTTC
  Y
  AGAGTAGCTA TAGACATGAT CATGTTCCAT CATGCCAGAA GAACATAAAC ATTTTTATTT
  GTCAGTTATA TATAATAAAG CATTGTAGCG AATGTCCATA TATCTAGAAG TCAAGAGCAG
  AAGGAGAGAA TTGAGAGCTA CAGCTCAAAC TGATGACTCT AGGAGGGTGG AGGTCATGGG
  ATATGAAGTA GCTCAGTGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45507780	mCV24042855	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss136082442	ENSMUSSNP4271070	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
ss321021770	CHEV_3_150154942	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31194163					SNP	T	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:150197615 () rs orientation: forward

Symbol	Name	Function Class
Rr587370	regulatory region 587370	1499 bp proximal