rs31191682 SNP Detail

Summary

• ID
  rs31191682
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:34725776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTT TTGACTGTTC ATTGAACCCA
  R
  GTGTGTGCCC ACTGATGAAG CCCAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45006409	mCV23105215	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31191682					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:34725776 () rs orientation: forward

Symbol	Name	Function Class
Rr546785	regulatory region 546785	1098 bp distal
Rr546786	regulatory region 546786	659 bp distal
Rr546787	regulatory region 546787	156 bp distal
Slc16a12	solute carrier family 16 (monocarboxylic acid transporters), member 12	1087 bp upstream
Tssr159005	transcription start site region 159005	1261 bp upstream
Tssr159006	transcription start site region 159006	1190 bp upstream
Tssr159007	transcription start site region 159007	1157 bp upstream
Tssr159008	transcription start site region 159008	1125 bp upstream
Tssr159009	transcription start site region 159009	1063 bp upstream
Tssr159010	transcription start site region 159010	1041 bp upstream
Tssr159011	transcription start site region 159011	927 bp upstream
Tssr159012	transcription start site region 159012	908 bp upstream
Tssr159013	transcription start site region 159013	882 bp upstream