rs31191347 SNP Detail

Summary

• ID
  rs31191347
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:79403035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAGTATT ATTCCACAAC
  AGAGAATGCT TGGGAATGTT TCAGAGAACC AACTGTATAG CCAGATACTT TTTCATCCTC
  TCTCCAGGTC CATGTGTGCT GCACAAGCTG TTTTGGAGTA CACAAACTGA AACAGCGCTT
  GCTTGGGGAC AGAAAGCTCT CTGGCAACGA TTGTAGAGTT ATAACCCAGG ATGCAGGCTC
  K
  TGGAAATCAA CAGTGACCAG ATGCTCATCC TGACTGACCC ATCAGCTCCA GCTCATGCTA
  CTGGATGCTC TGCGATGCAC TACAGGGAAG ATCCGGAAGC ACTCAGACCA GTTAGTGGGT
  TTTAAAACAT GAGCGCACAT GCATGCGTGC GCGCGTGCAC ACACACACAC ACACACACTC
  ACACCATGGC TACTCACTTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45506471	mCV24554577	ABI	CRAMUS_MOUSE	f	SNP		G	T					T		T
ss47031106	NES10777186	PERLEGEN	MM_PANEL2	f	SNP	G		T	T	T	T	T		T	T	T	T	T		T	T	T	G
ss135372341	ENSMUSSNP4974003	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T							T				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31191347					SNP	G	G	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47031106	NES10777186	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79403035 () rs orientation: forward

Symbol	Name	Function Class
Fnip2	folliculin interacting protein 2	Intron
Rr578528	regulatory region 578528	341 bp distal