rs31190165 SNP Detail

Summary

• ID
  rs31190165
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:152056594 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAGGTTCA AAGGGTATTG
  TGGCTCGGTA TCAGTGGTGT TAGCCCATGC TCTCATTCAG TAATCCTGGT GTGACAGAAC
  TGAGCTGAGA AGTGGTAAAA AGACACAGCT TGGCAGTAGA AGGGAAGGAG AGGGTCGAAG
  GGCAATGAAG TTAGGAAGCC TCTGCCACTG GCTTCCAAGT TATTTCAGGA GAATGAAGGA
  R
  CAGCAGAGTA GGTCGGGGTG GAGAGGTGAT GGTTGGTACT GTCAGTCTGC TTTCAGGGCT
  TGTAGCAACC CTGAAGTAGT GAGCCAGTGA GGCTGTGGTA CTCATGGGAG GTAAACAAGA
  CTGGATGGTT ACAATTGGTT ATGAAATCCC AAAGAAGGCA CTTTGAATAG GTTTGGTGGA
  AGCATTACTC AATGACTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45507256	mCV25024276	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss136102659	ENSMUSSNP3167314	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss321028737	CHEV_3_152013921	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31190165					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152056594 () rs orientation: forward

Symbol	Name	Function Class
Rr587536	regulatory region 587536	within coordinates
Rr587537	regulatory region 587537	967 bp proximal
Tssr32408	transcription start site region 32408	945 bp downstream
Usp33	ubiquitin specific peptidase 33	Intron