rs31189299 SNP Detail

Summary

• ID
  rs31189299
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69810585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTG CCCAGCATCT GTGAGCACAC
  R
  GGATGGCCCC TCTCCACAGA GAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45506451	mCV24612902	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss135272273	ENSMUSSNP1781923	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31189299					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69810585 () rs orientation: forward

Symbol	Name	Function Class
D3Mit277	DNA segment, Chr 3, Massachusetts Institute of Technology 277	176 bp proximal
Rr578240	regulatory region 578240	881 bp distal
Rr578241	regulatory region 578241	within coordinates