rs31186969 SNP Detail

Summary

• ID
  rs31186969
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83359324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACG GAAAGAATAA GGCTCTGTGG
  K
  TATGCTCAGG GTAACTTCTT TCTAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MSM/Ms	NZW/LacJ	SM/J	WSB/EiJ
ss45507502	mCV23503629	ABI	CRAMUS_MOUSE	f	SNP	T	G			G
ss51561911	NES14683376	PERLEGEN	MM_PANEL2	f	SNP	T		T	G		T			T		G
ss135415337	ENSMUSSNP1285411	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			G			G
ss320821480	CHEV_3_83255939	CHEVERUD	SCREENING_POP	f	SNP							G			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MSM/Ms	NZW/LacJ	SM/J	WSB/EiJ
rs31186969					SNP	T	G	T	G	G	T	G	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51561911	NES14683376	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83359324 () rs orientation: forward

Symbol	Name	Function Class
Rr578862	regulatory region 578862	999 bp distal
Rr578863	regulatory region 578863	1457 bp proximal