rs31183814 SNP Detail

Summary

• ID
  rs31183814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49860922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTAAATTTA AAAAAAAATA GAAGAGAAAA CAAAGAAGAT
  CCATGAGGCT GCAACCCTAT ACAAAAAAAA CCCAGGTAAC AGAGGAAACC TGAAGTAGAA
  Y
  AGGTCACCTT CAGCAAGAAA CAGCAATCCA ACTGGTTGTC CAGTGCTAAA CAGTAAACCC
  AACTAACATC ACATGGGCTC ATCATGTTAG TCCTAAAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45507085	mCV24438713	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss135146479	ENSMUSSNP277594	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31183814					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49860922 () rs orientation: forward

Symbol	Name	Function Class
Rr576122	regulatory region 576122	1920 bp proximal