rs31180596 SNP Detail

Summary

• ID
  rs31180596
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:13410210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAA TATATAAAGA AATGTTTATT
  R
  TCATGTACTA TGAAATGTAA ATTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	MOLF/EiJ
ss45004045	mCV23020627	ABI	CRAMUS_MOUSE	f	SNP	G	G		G	A
ss63224360	NES17473039	PERLEGEN	MM_PANEL2	f	SNP			G		A	A
ss146070458	ENSMUSSNP5225471	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	MOLF/EiJ
rs31180596					SNP	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63224360	NES17473039	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:13410210 () rs orientation: forward

Symbol	Name	Function Class
Or5b115-ps1	olfactory receptor family 5 subfamily B member 115, pseudogene 1	1309 bp downstream