rs31179515 SNP Detail

Summary

• ID
  rs31179515
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153440796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCGAGCCA AGCCTTCTCA
  ACAGGCAGCT GGCCTGCCTC TCCTGATGCC AAGGCTGGCA ACTGTATCTT TTGTCCTTCA
  AAAGTTAACA GGCAGAAGCA ATCTACCTCT GCTCACAGAC ACCTGGAAAC ATCAAACACA
  GCATGGCTCT GCCTCTTGTG GAGCCACCCT CCTCACACAA AGCTAGAAAC TGTGATCAAT
  R
  TAACACTTAG TTCACATACT CAATAAACTC AGTCAAGTGG AAAATCACAT AAAAGACATT
  CATGAGGGAG TGCTGGATGG ATGTGAGCCG CCCCAAATAA TTTGTCAATG AGTTCAAAAA
  TAATAAGCAA TTTTAAACCA TTTCCAAATT TAATATTTAT TATTTCTCCT TCAGCCCTGG
  GCATTACATT CCATTAAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45506486	mCV23504379	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss136111950	ENSMUSSNP4899994	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31179515					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153440796 () rs orientation: forward

Symbol	Name	Function Class
Rr587744	regulatory region 587744	715 bp distal
Rr587745	regulatory region 587745	1671 bp proximal
Tssr36241	transcription start site region 36241	1230 bp upstream