rs31171397 SNP Detail

Summary

• ID
  rs31171397
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:60100769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATC CACTATACTT TTGAACATAA
  M
  GTTTTATTGG AACACAATCA TATCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45003592	mCV23080531	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss146593494	ENSMUSSNP2115821	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss325879449	CHEV_19_60188240	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31171397					SNP	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:60100769 () rs orientation: forward

Symbol	Name	Function Class
Gm46663	predicted gene, 46663	within coordinates
Gm58965	predicted gene, 58965	1927 bp upstream
Rr550686	regulatory region 550686	1198 bp proximal