rs31166977 SNP Detail

Summary

• ID
  rs31166977
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:95824752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCCTTCAAA TATAAACATC CCTAGTCAGT ACATCCCACA
  GTGTAATTTT ATTTATAAAT ATTTCATGTG CAGACGTATA ATTTTTAAGT ATCAGAATTC
  R
  GACAAATAAG AATTTCCTGA ATGGAAATGA TTGACACGTC CAGAATTTTT CTAGAGAATC
  CTGCCTGCTA ATTCTTCTCT TTTTTCTTTT TTTGAATTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss48022467	NES11890347	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31166977					SNP	A	A	A	A	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48022467	NES11890347	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95824752 () rs orientation: forward

Symbol	Name	Function Class
Gm32009	predicted gene, 32009	within coordinates
Rr635045	regulatory region 635045	875 bp distal