rs31166133 SNP Detail

Summary

• ID
  rs31166133
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:95824311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAATAGG AATTTTTTTT
  TTTTTTTTTT TGGTTTTTTG AGACAGGGTT TCTCTGTATA GCCCTGGCTG TCCTGGAACT
  CACTTTGTAG ACCATGCTGG CCTCGAACTC AGAAGTCCAC CTGCCTCTGC CTCCCGAGTG
  TTGGGATTAA AGGCATGTGC CACAGGAAAA ACTTTTACAG AGATTAAATA GAGGTTTTTT
  Y
  CCCCAAACTT CCTGTCTGTT CAATTTTCTG TAAAACTTAA TTTTGGACAA AATAATTTGG
  CATAATATAA GAAAAAGTAA GTTTGCTTCA CTTAAGCTGA TCTAGATTAC ATACATTATT
  TCTGAGGACG TGGAGAATTC ACTCAAAACC ATAAAGTTTT AATACATTAG TGATCATAAA
  ATAACTGTTA AAAGAAAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48022463	NES11890339	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31166133					SNP	C	C	C	C	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48022463	NES11890339	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95824311 () rs orientation: forward

Symbol	Name	Function Class
Gm32009	predicted gene, 32009	within coordinates
Rr635045	regulatory region 635045	434 bp distal