rs31166129 SNP Detail

Summary

• ID
  rs31166129
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:95823712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATAAAAAC TTAATAGATA
  AACTTATAGA TAAAAAAGGC AGATATGTGG GGAGCACATC TGGATTTAAC TTTGGTTGTG
  ATTAATCATG AATGAGTCTG CTGACGTCTG TCTTTGTTTT TAGTTAAGAC ATGTGTTATA
  TCCTGCCAAC TTTCCCTGCT TACACATCTG TTCTTTAGAG ACTGTTCAAG CCTGAAGGAA
  R
  TGACCTTAGT TAAACATAGA TACTATGTAC CATAAACTCT CCAAGTAAGC CTTTGTGGTC
  AATGTTTAAC TTTCTGGAAT TGGTCTTGCT TTCTGTTACT TGCCTTTAAA AGACACAGGC
  TTACACTCAC AAGAAAAACA TCAGACAAAT GCAGTTGGTG ACAGTCTTAT GAGTTAATTG
  ACTGTATGCT TCTGAACTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48022459	NES11890424	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31166129					SNP	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48022459	NES11890424	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95823712 () rs orientation: forward

Symbol	Name	Function Class
Gm32009	predicted gene, 32009	within coordinates
Rr635045	regulatory region 635045	within coordinates