rs31165211 SNP Detail

Summary

• ID
  rs31165211
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:95823116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCTGTAT TTCCTTTCAT
  GACCCTTGTT TACATCTCTC TTACTGGGGG CTTGGCTTAA TGATCCTTTT TATGGCATGT
  CTATTACTTG TTCTTTTGTG AGGAATCGTC AGAGCTTTTA CAGATGTCAA AGCAGAATTA
  CATAAATTCA AGCTCCAACA TCTTCCCTAG CAGAAGGTGA TAGTCAATTA TGGGTAAGAT
  R
  GTCTTGAAAG CCTTCTCAAC CTAAGACAGA CCATGAATAC AAGATTAATC ACGTGCCAAT
  GATGGGTAAG AGCTGTGTTT TCAGATGGCA ACCTAAGACA GGCACAACTT TCTTCTCTGT
  GACTGATAGA AAAAAAAAGG ACAGAGGTGG ATAAACCTTA GATAGGGCAT GAATGCTAGA
  ATTCATGTAC CAATGATGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48022451	NES11890466	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31165211					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48022451	NES11890466	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95823116 () rs orientation: forward

Symbol	Name	Function Class
Gm32009	predicted gene, 32009	within coordinates
Rr635045	regulatory region 635045	483 bp proximal