rs31165207 SNP Detail

Summary

• ID
  rs31165207
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:95821792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGACCCAC TTTTACTACA
  TCCTTCTGTA TAGTCAAGAC CAGAAATACT AATGACCTCT AATAATACTC AGCTGTTAGG
  GTTTCCTTGG TCTGAGAGTA AAAAGTATTC CAAATTGGCG AAACACACTT CTATGGGTCA
  GGGCTTACCT ATTTGTTTTA CTAGAAATAG TGCCAATGCT GGATGTGTTC TTGTGGCCCC
  Y
  CAGACTTGGA AGAAGACTAT CTCTAAGACT GTAGTGCAAA GCATTAAGAT GGGAAGGCCC
  ATAGCTCAGA CTGGACAAGT TGCCCTGCCT CAGGTTTTTA GACCTTGTAG GACAGAGAAC
  ATGGAGACTG TAGAACCTGC CTTCAAAAAA AAAATCAATC AAATGGCAAA ATTGTTATAA
  TGACTCTCCT CTTTCCTTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48022447	NES11890521	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31165207					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48022447	NES11890521	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95821792 () rs orientation: forward

Symbol	Name	Function Class
Gm32009	predicted gene, 32009	within coordinates
Rr635045	regulatory region 635045	1807 bp proximal