rs31157419 SNP Detail

Summary

• ID
  rs31157419
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:95677171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTGAATCTG AAAAACCAAG CAATGCCACA GAGAGACAGA
  GGTCACATCC AAAACAAAGG ACAACAGATG ACCCACACTA GAAGAAGGTG GCAGGAGGCG
  R
  AGATGCAGAG CTGGCTCCCA ACCTTAGTGG CTCAAAACTT CAGGAGTTTC ATAGTGAAAG
  ATGTGAAGGA TGATATCAGG GTCGCGTAAT GGTTTAAAGT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss48021221	NES11896995	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs31157419					SNP	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48021221	NES11896995	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95677171 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr635029	regulatory region 635029			1240 bp distal
Rr635030	regulatory region 635030			999 bp proximal
Rr635031	regulatory region 635031			1762 bp proximal
Suclg2	succinate-Coenzyme A ligase, GDP-forming, beta subunit			Intron
				Noncoding-Transcript-Variant