rs31156715 SNP Detail

Summary

• ID
  rs31156715
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144387204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTCAATTG ACTTTTTATA
  GTCCCACAGA TGAGAAGAGT CAGAAGCAGA AACAGAGCTC AAGCATTCTG TATCCCAAGC
  CAGTCTGACG AACAACCTCT CTGGGACTGG GGGAGCTTTA CTTACTAGGA GAGTTGGGAA
  GAAGACCTGA GACTGGGCGG GGGCTCTGCT GTGTAGTCAA CTCTCAGAGC ACATAGGTGG
  R
  AATCCCTCAA ACACAGATGT ATTGAGGGGT TAAAGTTAGG GTGGGCGTAG TTTTGGTAGT
  TAAAGGAACA GTAGGAGTGG TCATGAAGGG AGGTCTACAG CCATGGCAGT ATATCTGATA
  ACCTATGGGA AAACGAGAGG TGCTAGCATC CAGAGGAGAG GGAGGGATGG GAGGAACGGC
  TCAGGACACT GCAAGCATCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47021902	NES10867402	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31156715					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47021902	NES10867402	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144387204 () rs orientation: forward

Symbol	Name	Function Class
Rr586705	regulatory region 586705	within coordinates
Rr586706	regulatory region 586706	731 bp proximal
Rr586707	regulatory region 586707	1377 bp proximal