rs31154221 SNP Detail

Summary

• ID
  rs31154221
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:38179493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTA AACCCAGGAT CTTAAACATG
  M
  TAGCAAGAGC TCCACAGTGG GCGGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
ss45001969	mCV25094023	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss146362620	ENSMUSSNP3402669	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
ss325801576	CHEV_19_38265535	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
rs31154221					SNP	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:38179493 () rs orientation: forward

Symbol	Name	Function Class
Fra10ac1	FRA10A associated CGG repeat 1	Intron
Rr547248	regulatory region 547248	408 bp proximal