rs31151826 SNP Detail

Summary

• ID
  rs31151826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144388502 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGCTTCGT GGAGGACGGT
  AGATGAATAG ACCAACAGGG GAAGGGGATA CTCATAGAGA AGAGAACTGA CTTGGTTAAA
  ATGTCTGTAA GATAGCAGTT ATGTCTGAGT ACATTCATAT GTTGGCTTGT AATAGTCCTG
  TGGTTTATGG TATTTAGTCG AATATAGGGG ATAGTCTAGA ATATTGAATT TATAGTCATG
  Y
  TTACATGCTA GGGGAAGATA TCCATGACCT TCTGATTCTA GGGGCTGTAT TTTAAAGAAC
  CTCTGACTTA AACCGACATT GATTGCTCTT TCAGATGTGG CAGTTAATGA GGCCAGCAGG
  TCCCCTGTTG GCTCAGTGGG CTGTAGGTAT TTTTAGTTTA GTTCATAGTT AGGGGCAACA
  CATTTTCTGC TTCATAAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss47021936	NES10867421	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs31151826					SNP	T	T	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47021936	NES10867421	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144388502 () rs orientation: forward

Symbol	Name	Function Class
Rr586705	regulatory region 586705	849 bp distal
Rr586706	regulatory region 586706	326 bp distal
Rr586707	regulatory region 586707	79 bp proximal
Rr586708	regulatory region 586708	1573 bp proximal
Sh3glb1	SH3-domain GRB2-like B1 (endophilin)	937 bp downstream