rs31151016 SNP Detail

Summary

• ID
  rs31151016
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27156034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCACTTAT ACCTAAATCA
  CCAACAACTC ACTCACGTCT GGTTCATACA ATAGTCACTG CAACAAGAAT GCAACAGCAA
  GCCGGGCTGT GATGGTGCAC GCCTTTAATC TCGGCACTTG GGAGGCAGAG GCAGGCGGAT
  TTCTGAGTTC TACAAAGTGA GTTCCAGGAC AGCCAGGGCT ACACAGAGAA ACCTTGTCTC
  R
  AAAAAAAAAA AAAAACAAAA AGAACCAAAC CAAACCAAAC CAAACCAAAA AAAGAATGCA
  ACAGCAAGCT ATTTGTAAGC ACTGTGACAA AGAAGTCACT GACCATTATA AAATGTAATC
  TGTGAGTCAT TTCCAAGTAC TGTAGGTCAG CTTTGTTGTA AACTGGGGTA TGTGTGTGTT
  TGTGTGTTTA CACGTGCATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45505221	mCV24739732	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss134702038	ENSMUSSNP6181721	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31151016					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27156034 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574344	regulatory region 574344	1089 bp proximal