rs31147941 SNP Detail

Summary

• ID
  rs31147941
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:103241076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTGCCAGTT TGTTCTGCTA TCACCTCTAA TTCTCCGTGT TTTCATGGTT TCAAAAATAT
  AACATTGGCT TCATTTCCTA TTTTCTTTTA TTCTGACTCC TGTGTCATAC TCTGAACTTT
  TTTTTTTTTT TTTTGGTACA TAAAATATGT GACCTTTTAT GCCTGCACTT TCTTCACTTA
  GTCTATAGGT ATGTCTATTA TAACTTAATT ATTTCTATGG CTGCATAATA TTTCATTGTA
  TAGAGTTCTC TTTCTTTTTT CTTCTTTTGA AGAAAGGGAC TTGAAGTGTA GTCTGGTCTA
  R
  AGTCCACTGT GTAGCTCAGG CTGGCTCAGA CTAATTTTGT ACTTCACGCT CACATGGTAG
  GATTAAAGGC AGGCACCCCA AGCCTGTTTC TGACTTTGTA TCTATGGTGA TAGTGCTGAG
  AGTCTTAGAC TGTACTATGT GTCTTCATGT ATTAGTTGAT GGCTATTTCA ATTTCTACTT
  TTTGCCTGTA AGGAAATAAT AGTAATACAA GCTTCTCTCT ATAATAGTGG TTCTCCCCCT
  TCTACCCTTT AAAACACCTC CTCATGTTGT GCTGACCCCC AAACATAACT GAAATTTTGC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45503849	mCV24543811	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31147941					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103241076 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm43061	predicted gene 43061			within coordinates
Rr582347	regulatory region 582347			1818 bp proximal
Trim33	tripartite motif-containing 33			Intron
				Noncoding-Transcript-Variant