rs31145814 SNP Detail

Summary

• ID
  rs31145814
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144369228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCGGCCAC ACTTCTGATT
  CTGCAAGATG GTATATATAG TTGTTCTTAT TGCTGGAGGA GATGGTGTGC TTCTCAGGAC
  CTGCCTACCC TTGCACCAGC TGGCAACTCT GCTTTCATAA ATAGTTAACA TCCTCTGAGG
  AGGGAGTCTG CAATGGCTGG CAGTGCTCTT CCTGGAATCC TATGTAACTG ACCACAGGTT
  S
  CTGGCTTATC TGTCTTGTGC CTTTAGCCTT GAAGGAGGGA GGAGATAAGG CAAGGTAGAC
  AGACACTCCT TGTGTGACTA ACAAGCTGAC TCAGACAGCA GAGATACCAT AGTAGAACTG
  AAAGAGACCC TCAAGATGGA GACAGAGCTT CCAAACTTGA ATCTCAGGAG CCTAAACTCT
  CAGGAGCCCA AACGATGATT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	DBA/2J	WSB/EiJ
ss47021734	NES10868425	PERLEGEN	MM_PANEL2	f	SNP	C	G	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	DBA/2J	WSB/EiJ
rs31145814					SNP	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47021734	NES10868425	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144369228 () rs orientation: forward

Symbol	Name	Function Class
Rr586700	regulatory region 586700	1724 bp distal
Rr586701	regulatory region 586701	549 bp distal
Rr586702	regulatory region 586702	within coordinates
Rr586703	regulatory region 586703	1329 bp proximal