rs31141519 SNP Detail

Summary

• ID
  rs31141519
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146048756 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAGCCAA GCCTGGGTGA
  TAAAACAGCA AAGTGGCAAC TAGATTGGTG GAAAAAGCTC AGGTGAGCAC ATGGCCCACA
  GAGGTGCAAG CCAGAGAGAG GTGATACAAT GTGTCCAGAG ACAATGGCAC ACAATGGAAG
  ACTGTAACAT TGTAGTTACA AAGTGGGATA CATAGTAACA GTAGGACAAG GCGAGGTACA
  Y
  TCATTACTTC TGTTGTTGTG AGCAAGTATC TGTCAGAAGC AGCCTCAGGG AGGAAGGGTT
  GGTGCTGGCT CACAGTTTTG GGGATTCTCA GTCCATCACA GTGGATAAAG CATAGTGACT
  GTAGTAGCTT GGTCCCTGAC AGAGGGTGAA GTGCCCTGTG GCTGGCCATA GCACAGAGCT
  GGGTGGAAGT GGAGAGTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45502548	mCV24237045	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss136043373	ENSMUSSNP492038	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
ss321010003	CHEV_3_146005965	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31141519					SNP	T	T	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146048756 () rs orientation: forward

Symbol	Name	Function Class
Rr587007	regulatory region 587007	509 bp distal
Rr587008	regulatory region 587008	703 bp proximal
Rr587009	regulatory region 587009	812 bp proximal