rs31141462 SNP Detail

Summary

• ID
  rs31141462
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:40497076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGCC GAACAGAGCG TCAGAAGAGC
  R
  GAGCTGACAC TTAGGTGACC ACCAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss45502742	mCV22373823	ABI	CRAMUS_MOUSE	f	SNP	G	G	A					G	G
ss60393563	NES15898239	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	G	G	A		G	A	G	G	A
ss135039498	ENSMUSSNP4273899	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs31141462					SNP	G	G	A	G	G	G	A	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60393563	NES15898239	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:40497076 () rs orientation: forward

Symbol	Name	Function Class
Gm30184	predicted gene, 30184	within coordinates
Rr374853	regulatory region 374853	964 bp downstream
Rr575816	regulatory region 575816	1014 bp proximal
Rr575817	regulatory region 575817	1507 bp proximal