rs31140930 SNP Detail

Summary

• ID
  rs31140930
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151272039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCGACAGG AATAAATAAC
  ACTCTGGGGC CTGTTGTTTC AGGTGCAAGC CATCCCTACT AAGTTTAAAG ATGTTAAAAA
  TCACCTACCT TGGTTGTACT TTCACCATAA CCAAAAGTAA TACAAATACA GATTTTAACA
  ATCTTTTCAG GGACTTCTGT TTCCACGCAC TGGGAGCTGG GGATTCACAC ATATAATTCC
  Y
  ATTAACACTA ATAGGAGTTG GAGTGTGTAC GCCAATTCCC TTGTGTTGAA ATAAGTCCAT
  AACCATATGG ATACTAATAA ATACATTTTT AATTCCAGTT TTATGCAGAT TTTATGTAAT
  ATTTTATACA ACACTTAGCA AACTCTTTGG AGACAAAGAT TGCTTCTATT AATTCTCACA
  AACAGAGACA CAAATTCCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45503224	mCV23272541	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss136095800	ENSMUSSNP6673475	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss321026073	CHEV_3_151229366	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31140930					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151272039 () rs orientation: forward

Symbol	Name	Function Class
Rr587404	regulatory region 587404	within coordinates
Rr587405	regulatory region 587405	206 bp proximal
Rr587406	regulatory region 587406	455 bp proximal