rs31138846 SNP Detail

Summary

• ID
  rs31138846
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151557637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAATTAT CAAACCAAAT
  AAAAGTTATC AGTACGTTTG CCAGGATGTA TCGGGCACAG CAAAGACATC AGGAAGAGGA
  TGTGGCTGAG GTTGAAGAGA ACACCAAGAA GATGAAAAGA CATCTCTGTC CATGGATTAA
  GAGAATCATG GTAGCACTTC CAAACTCGCA AAGCGACCTA CATTGCCATC ACCACAGTGT
  R
  GTCTCTATCA GAACATCAGT GACAGCCTTC ACAGAAGCAG CAAACCACAC AACCTTCTTC
  ACAGCCACAG CAGCCTTGAA CAAAGAGGAC AAAGCAGGAG ACATTGTATT ACCTCACTTC
  CAAAGTCACT AAAAGGCTTT AGTTGTCAAA AAAATATGAT ACCTGCATAA TAGTAGACAC
  ATAGACCAAC ACCCAGAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45502421	mCV24029240	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss321027295	CHEV_3_151514964	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31138846					SNP	A	G	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151557637 () rs orientation: forward

Symbol	Name	Function Class
Gm31596	predicted gene, 31596	within coordinates
Rr587424	regulatory region 587424	351 bp distal