rs31136792 SNP Detail

Summary

• ID
  rs31136792
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101260762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCCCTGGC TGACTAGGAA
  CTCTATATGT AGACCAGGCT GGCCTAGAAT TCACAGAGAT CCACCTGCTT CCATCTCTTG
  AGTGCTTGAA AAATACATCT TAAAAAAGAA GACCTATCCT TGTTCTGAGT AGCTCCATAG
  TGAAGTGTCA CAATGTATGC GGCTTACTTT GAAATACTTT AGCAAAAAAG CACATGTATA
  M
  ATATGGCTAC TTATGTGCAT GCACACCTAT GTATATATGC AGGTCATACA CACACCATGT
  AGGTCATACA AGCACAAAGG ATAAGGACTG TATAGTGGTT TGAATAAAAA TAGCACCCCT
  AAACCCATAA GGTCTGGTAT TATTAGGAGG CGTGGCCTTT TGGAGGAGGT GTGGCTTTGC
  TGGAGGAAGT TACATCACTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45502406	mCV23815915	ABI	CRAMUS_MOUSE	f	SNP		A	C			A
ss46813874	NES10711855	PERLEGEN	MM_PANEL2	f	SNP	A		C	C	A		C	A	A	A	C	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31136792					SNP	A	A	C	C	A	A	C	A	A	A	C	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46813874	NES10711855	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101260762 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	within coordinates
Rr582017	regulatory region 582017	772 bp proximal
Rr582018	regulatory region 582018	1010 bp proximal