rs31134221 SNP Detail

Summary

• ID
  rs31134221
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:78854543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTCA GAACTGACAG AAGGAGACTT
  R
  CTCAGATGGA CAACAAAGAT TACCG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45500758	mCV24565178	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss135365315	ENSMUSSNP1200821	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320809317	CHEV_3_78751158	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31134221					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:78854543 () rs orientation: forward

Symbol	Name	Function Class
Gm65474	predicted gene, 65474	1010 bp upstream
Rr578444	regulatory region 578444	920 bp proximal
Rr578445	regulatory region 578445	1021 bp proximal
Rr578446	regulatory region 578446	1189 bp proximal